Akos T. Kovacs @EvolvedBiofilm Twitter profile

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Akos T. Kovacs

4 months

Happy to share our @ISMEJournal paper how competition for iron shapes interaction of Bacillus subtilis and Pseudomonas marginalis A project led by @MarkLyng5 in colaboration with @cemist_dtu colleagues -funded by @GrundforskFond & @novonordiskfond 👇🧵

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Akos T. Kovacs

@EvolvedBiofilm

3 years

It is #BiofilmWeek Did you know that the surface of Bacillus subtilis biofilms is extremely repellent to water?

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Akos T. Kovacs

@EvolvedBiofilm

5 years

@GillesvanWezel My daughter: but if your are princess, you have more money, so you can be a scientist easier, right?

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Akos T. Kovacs

@EvolvedBiofilm

5 years

They try to escape! Bacillus subtilis colonies in a 9cm 🧫 -from Stevanus Listian (MSc student in the lab) #TheSecretMedium #MarvelousColonies

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Akos T. Kovacs

@EvolvedBiofilm

4 years

The art of plate drying - by @MathildeNordga1

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Interesting perspective piece by @JPox14 and Kevin Foster in Science magazine Bacterial species rarely work together

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Akos T. Kovacs

@EvolvedBiofilm

3 years

See our new @NatureRevMicro Review on B.subtilis biofilm and its social side - with @MicroSofia @natalie_bamford and @bacteriacities #matrix #biofilmregulation #plantinteraction #probiotics #evolution #application #SecondaryMetabolites #interaction

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Akos T. Kovacs

@EvolvedBiofilm

2 years

The past, present, and future of antibiotics Review in @ScienceTM

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Microbial diversity in extreme environments -in @NatureRevMicro

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Akos T. Kovacs

@EvolvedBiofilm

9 months

Nice Review paper in Microbiology by @natalie_bamford @sciorama and @bacteriacities Microbial Primer: An introduction to biofilms – what they are, why they form and their impact on built and natural environments

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Disaster Microbiology—a New Field of Study @mbiojournal MiniReview from @ACasadevall1

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Akos T. Kovacs

@EvolvedBiofilm

1 year

9 years of work and 20 authors in one manuscript, glad to share our brand new preprint with a thread👇 Enhanced niche colonisation and competition during bacterial adaptation to a fungus [1/n]

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Akos T. Kovacs

@EvolvedBiofilm

6 years

Twitter-full author list...

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Akos T. Kovacs

@EvolvedBiofilm

7 months

Apparently only males see the future of microbiology? Important note: I respect highly each and every scientist on the photos (some I regard as part time mentor and friend in science), it just looks obviously biased selection.

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Akos T. Kovacs

@EvolvedBiofilm

5 months

Metabolic exchanges are ubiquitous in natural microbial communities @NatureMicrobiol perspective by @KostChristian , @kiran_r_patil , @JFriedman_micro , @sarilog , and @RalserLab

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Genomic structure predicts metabolite dynamics in microbial communities -in @CellCellPress

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Akos T. Kovacs

@EvolvedBiofilm

3 years

Glad to be involved in this great work by @Anna_Dragos and @Mikael_lenz , a @GrundforskFond funded @cemist_dtu project published in @CurrentBiology Phages carry interbacterial weapons encoded by biosynthetic gene clusters with @neftalyl @pkempen

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Akos T. Kovacs

@EvolvedBiofilm

2 years

The biofilm life cycle: expanding the conceptual model of biofilm formation @NatureRevMicro by @KarinSauer7 @PaulStoodley1 , Darla Goeres, Luanne Hall-Stoodley, @metteburmolle , Phil Stewart & @TBjarnsholt

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Akos T. Kovacs

@EvolvedBiofilm

2 years

100 papers published since I entered science as diploma/PhD student at @Uni_Szeged , through a post doc in @univgroningen , starting my group at @UniJena / @JSMC_Info , and finally as professor at @DTUtweet / @DTUbioengineer / @cemist_dtu ; I am certainly grateful for all who contributed

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Akos T. Kovacs

@EvolvedBiofilm

6 months

I defended my PhD thesis 20 years ago... what a journey since then: post doc in Szeged🇭🇺and Groningen🇳🇱, a junior group in Jena🇩🇪, professor in Copenhagen🇩🇰, now in Leiden🇳🇱 with >110 publications (70% first/last/corr author), 11 PhD graduates & 60 MSc/BSc theses from my group

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Akos T. Kovacs

@EvolvedBiofilm

10 months

See the August issue of @TrendsMicrobiol online with a beautiful cover art @LizahvdAart has prepared for us, highlighting the review of @MarkLyng5 - Frenemies of the soil: Bacillus and Pseudomonas interspecies interactions

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Akos T. Kovacs

@EvolvedBiofilm

3 months

Beautiful Paenibacillus in the lab -plate by @CajaDinesen #MicrobiomeEcology at @LeidenBiology

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Akos T. Kovacs

@EvolvedBiofilm

1 year

‼️MDPI, Frontiers & Hindawi are blacklisted by Zhejiang Gonggong University‼️👇👇👇 "The university issued a notice stating that articles published by Hindawi, MDPI and Frontiers will not be included in research performance statistics. "

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Akos T. Kovacs

@EvolvedBiofilm

5 years

Gorgeous Bacilli... students were active during the weekend in the lab (Photo credit: Tomislav - Erasmus+ student from 🇭🇷) #Bacillus #microbiology

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Akos T. Kovacs

@EvolvedBiofilm

10 months

Really cool @EvolLetters from @StuWest8 @GhoulMelanie and colleagues Signatures of kin selection in a natural population of the bacteria Bacillus subtilis

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Akos T. Kovacs

@EvolvedBiofilm

2 years

A bacterium that is not a microbe Perspective by @PetraLevin in @ScienceMagazine

A bacterium that is not a microbe

A new discovery challenges the prevailing view of the boundaries of bacterial cell size

www.science.org

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Akos T. Kovacs

@EvolvedBiofilm

3 years

#ISME18 Symposium by @ISME_microbes found a new home for 2022 in Lausanne🇨🇭. Looking forward to attend again next year and enjoy the best of Microbial Ecology! Follow the conference here👇

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Akos T. Kovacs

@EvolvedBiofilm

5 months

Workshop‼️ One Health and antimicrobial resistance: role of antibiotics, antimicrobial peptides and biocides 29 & 30 January 2024 in Berlin, Germany and online

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Akos T. Kovacs

@EvolvedBiofilm

1 year

It is MolMicro Sunday! 🎉

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Akos T. Kovacs

@EvolvedBiofilm

1 year

Disentangling arbuscular mycorrhizal fungi and bacteria at the soil-root interface -in Mycorrhiza (review)

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Akos T. Kovacs

@EvolvedBiofilm

10 months

A new beginning

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Akos T. Kovacs

@EvolvedBiofilm

3 years

A superb collaboration with @knutdrescher group @RaimoHartmann , @HannahJeckel and @JelliEric 's BiofilmQ paper is now out in @NatureMicrobiol #OpenAccess #biofilm

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Akos T. Kovacs

@EvolvedBiofilm

7 years

1st July... starting from today: Professor of Bacterial Physiology and Genetics #finallytenured

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Akos T. Kovacs

@EvolvedBiofilm

5 years

Sorry, excuse me? "first data from a 500-year microbial experiment, which started in 2014 and will finish in 2514" @PLOSONE from Ralf Moeller: Experimental studies addressing the longevity of B. subtilis spores – The first data from a 500-year experiment

Experimental studies addressing the longevity of Bacillus subtilis spores – The first data from a...

The ability to form endospores allows certain Gram-positive bacteria (e.g. Bacillus subtilis) to challenge the limits of microbial resistance and survival. Thus, B. subtilis is able to tolerate many...

journals.plos.org

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Akos T. Kovacs

@EvolvedBiofilm

5 months

A Bacillus velezensis strain improves growth and root system development in Arabidopsis thaliana through cytokinin signaling -in Rhizosphere

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Akos T. Kovacs

@EvolvedBiofilm

5 months

Microbe of the month: Pseudomonas aeruginosa @TrendsMicrobiol by @KrellLaboratory and @miguel_matilla

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Akos T. Kovacs

@EvolvedBiofilm

1 year

Breaking down microbial hierarchies @TrendsMicrobiol Spotlight by @SnorreSulheim and @saramitri on the @ISMEJournal paper of @MicrobeDaniels from @MicSysEcoLab

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Akos T. Kovacs

@EvolvedBiofilm

3 years

After having number 90 accepted last week, time to update my #PublicationTree

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Akos T. Kovacs

@EvolvedBiofilm

3 years

Effective image visualization for publications – a workflow using open access tools and concepts @F1000Research by @ChriSchmied & @helenajambor -with great cheat sheets (HT @MarkLyng5 )

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Akos T. Kovacs

@EvolvedBiofilm

3 years

A synthetic antibiotic class overcoming bacterial multidrug resistance -in @Nature

A synthetic antibiotic class overcoming bacterial multidrug resistance

Nature - Structure-guided design and component-based synthesis are used to produce iboxamycin, a novel ribosome-binding antibiotic with potent activity against Gram-positive and Gram-negative...

www.nature.com

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Akos T. Kovacs

@EvolvedBiofilm

1 year

Cell-to-cell non-conjugative plasmid transfer between Bacillus subtilis and lactic acid bacteria @MicrobialBiote1 by @LpMorawska and @OscarKuipers1 #nanotubes

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Akos T. Kovacs

@EvolvedBiofilm

4 years

This week was the 20th year anniversary I have started my PhD... a long way from Hungary, through the Netherlands and Germany to the Professorship in Denmark

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Akos T. Kovacs

@EvolvedBiofilm

3 years

It is #BiofilmWeek Did you know that if you leave your soup at room temperature, Bacilli can produce nice floating biofilm, called pellicles?

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Akos T. Kovacs

@EvolvedBiofilm

4 years

Intra-colony channels in E. coli function as a nutrient uptake system -in @ISMEJournal by @lmr_1994 et al from @gailmcconnell w/ @PaulHoskisson

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Akos T. Kovacs

@EvolvedBiofilm

3 years

The evolution of strategy in bacterial warfare via the regulation of bacteriocins and antibiotics @eLife by @NeneRiehus et al with Kevin Foster

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Akos T. Kovacs

@EvolvedBiofilm

6 years

Bit of disruption from #ASMBiofilms Our paper in @NatureMicrobiol is now online: Collapse of genetic division of labour and evolution of autonomy in pellicle biofilms by @Anna_Dragos collaboration with @BangeBalcony @lopesrra LielegLab @caroflcn

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Akos T. Kovacs

@EvolvedBiofilm

9 months

Endosymbionts: Bacterial hijacking of fungi? @CurrentBiology Dispatch by Jan Dijksterhuis @_Westerdijk_ on @Funbiosis2017 's paper from @Hertweck_Lab at @LeibnizHKI @chembiosys_jena with @TheStanleyLab @HillmannLab @IFerling

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Akos T. Kovacs

@EvolvedBiofilm

7 months

Engineering microbiomes to transform plastics @TrendsinBiotech Forum by @Jimenez_ADJ , @asanchez_lab , and @FDiniAndreote

Engineering microbiomes to transform plastics

The design and study of active microbial consortia able to degrade plastics represent an exciting area of research toward the development of bio-based alternatives to efficiently transform plastic...

www.cell.com

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Akos T. Kovacs

@EvolvedBiofilm

6 years

Colourful interaction from the lab: redFP labeled Bacillus subtilis hugs an eukaryotic colony

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Akos T. Kovacs

@EvolvedBiofilm

1 year

See this superb online resource by Catherine Oikonomou & @theJensenLab : The Atlas of Bacterial & Archaeal Cell Structure - open-access digital textbook with cutting-edge 3D electron microscopy now includes animated videos illustrating methods‼️

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Akos T. Kovacs

@EvolvedBiofilm

3 years

Behind the paper: Fungal-bacterial biofilm assembly

Fungal-bacterial biofilm assembly

Our skin is our largest organ and functions as a physical barrier to the outside environment. When this barrier is breached in the form of a wound, our skin heals itself through a coordinated wound...

communities.springernature.com

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Akos T. Kovacs

@EvolvedBiofilm

6 months

The interplay between microbial communities and soil properties @NatureRevMicro by Laurent Philippot @ClaireChenu2 Andreas Kappler @mrillig and @NoahFierer

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Having a talk on a real conference feels just amazing after 2 long years #BartjeAroundTheWorld

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Akos T. Kovacs

@EvolvedBiofilm

11 months

When does a Lotka-Volterra model represent microbial interactions? Insights from in vitro nasal bacterial communities @mSystemsJ from @bmomeni

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Do microbes have a memory? History-dependent behavior in the adaptation to variable environments -in a Frontiers journal from @KevinVerstrepen #yeast

Frontiers | Do microbes have a memory? History-dependent behavior in the adaptation to variable...

Microbes are constantly confronted with changes and challenges in their environment. A proper response to these environmental cues is needed for optimal cell...

www.frontiersin.org

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Akos T. Kovacs

@EvolvedBiofilm

3 years

Fresh PhD thesis booklet by @MathildeNordga1 on Bacillus subtilis interaction and experimental evolution with Arabidopsis, the sweet fruit of her 3 years work

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Mechanical forces drive a reorientation cascade leading to biofilm self-patterning -in @NatureComms

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Akos T. Kovacs

@EvolvedBiofilm

5 years

Did you know that you can grow Bacillus subtilis buofilms in your own kitchen? Make a soup with potato, leek and soup broth and wait few days... #InternationalMicroorganismDay #BiofilmSoupChallenge

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Akos T. Kovacs

@EvolvedBiofilm

3 years

No, no, noooo... 😱 definitely NOT a fungus!

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Akos T. Kovacs

@EvolvedBiofilm

1 year

PhyloPlus: a Universal Tool for Phylogenetic Interrogation of Metagenomic Communities -in @mbiojournal

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Akos T. Kovacs

@EvolvedBiofilm

4 years

Friday Afternoon 🍾 🥂 (at home) to celebrate becoming member of the Editorial board in a microbial ecology journal + getting also a manuscript accepted there Cheers to @MartinMavs @Anna_Dragos & Simon

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Akos T. Kovacs

@EvolvedBiofilm

10 months

Last day at DTU… 👋🏼

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Akos T. Kovacs

@EvolvedBiofilm

1 year

Happy to share our new review by @MarkLyng5 : Frenemies of the soil: Bacillus and Pseudomonas interspecies interactions #OpenAccess - funded by @cemist_dtu / @GrundforskFond and #NNF_Interact / @novonordiskfond #biocontrol #SecondaryMetabolites

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Mutualistic interplay between bacteriophages and bacteria in the human gut @NatureRevMicro by @AShkoporov @Chrisjrt and @colinhillucc

Mutualistic interplay between bacteriophages and bacteria in the human gut

Nature Reviews Microbiology - Bacteriophages are obligate parasites of their bacterial hosts; nevertheless, on a population level, phage–bacterium interactions can have beneficial outcomes....

www.nature.com

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Akos T. Kovacs

@EvolvedBiofilm

8 months

What is microbial dormancy? @TrendsMicrobiol from @jlw_ecoevo

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Akos T. Kovacs

@EvolvedBiofilm

2 years

See our @mbiojournal commentary with Francesca Sartor on rhytmic colony patterns and the conceptual requirements for proving the presence of a prokaryotic circadian clock behind pattern formation /on the paper by @lj_kahl et al from @laahrs #circadian

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Does phage-mediated horizontal gene transfer represent an environmental risk? - @TrendsMicrobiol Forum from @balcjos

Does phage-mediated horizontal gene transfer represent an environmental risk?

A growing number of recent studies suggest that the contribution of phages to antibiotic resistance should not be underestimated. Here we describe their implications for public and environmental...

www.cell.com

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Akos T. Kovacs

@EvolvedBiofilm

2 years

See our cover on the current issue of @iScience_CP , an artistic depiction by the talented @LizahvdAart on how Bacillus subtilis cells swim towards a new, uncolonized plant root during our experimental evolution setup - original paper by @MathildeNordga1

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Harmonizing Prokaryotic Nomenclature: Fixing the Fuss over Phylum Name Flipping -opinion in @mbiojournal

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Akos T. Kovacs

@EvolvedBiofilm

2 years

How Escherichia coli Became the Flagship Bacterium of Molecular Biology @JBacteriology MiniReview by Natividad Ruiz and Thomas J. Silhavy

How Escherichia coli Became the Flagship Bacterium of Molecular Biology | Journal of Bacteriology

Escherichia coli is likely the most studied organism and was instrumental in developing many fundamental concepts in biology. But why E. coli? In the 1940s, E. coli was well suited for the biochemi...

journals.asm.org

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Akos T. Kovacs

@EvolvedBiofilm

4 months

Starting 2024 with a PhD position advertised in our new group at @LeidenBiology @LeidenScience on the topic "Spatial and temporal plant microbiome" Apply before 11 February 2024

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Akos T. Kovacs

@EvolvedBiofilm

3 years

Realities and hopes in the application of microbial tools in agriculture -in Microbial Biotech (review)

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Akos T. Kovacs

@EvolvedBiofilm

4 months

Nutrient status changes bacterial interactions in a synthetic community -in @AppEnvMicro

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Akos T. Kovacs

@EvolvedBiofilm

6 months

Reactivity of complex communities can be more important than stability @NatureComms by Yuguang Yang, @katcoyte , Kevin R. Foster & Aming Li

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Akos T. Kovacs

@EvolvedBiofilm

11 months

Accounting for 16S rRNA copy number prediction uncertainty and its implications in bacterial diversity analyses -in @ISMEComms

Accounting for 16S rRNA copy number prediction uncertainty and its implications in bacterial...

ISME Communications - Accounting for 16S rRNA copy number prediction uncertainty and its implications in bacterial diversity analyses

www.nature.com

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Akos T. Kovacs

@EvolvedBiofilm

4 years

How else would you celebrate the first reconstructed Bacillus thuringiensis mutant in the group than a clean-streak blood plate? Great results on the phenotypes by undergrad students are on the way... #ReplayingEvolution

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Akos T. Kovacs

@EvolvedBiofilm

11 months

High impact packing material 😳

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Akos T. Kovacs

@EvolvedBiofilm

5 months

The honeybee microbiota and its impact on health and disease @NatureRevMicro by @ErickMotta19 and Nancy Moran

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Family Xmas Greetings from my hometown, Hódmezővásárhely 🇭🇺

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Akos T. Kovacs

@EvolvedBiofilm

9 months

Superb @ISMEJournal by @kccosetta et al from @LupoLabs how Staphylococcus adapt to distinct microbial partners Bacterial–fungal interactions promote parallel evolution of global transcriptional regulators in a widespread Staphylococcus species

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Akos T. Kovacs

@EvolvedBiofilm

3 years

Glad to see the current issue of @NatureRevMicro with a cover inspired by our B. subtilis biofilm review with @MicroSofia @natalie_bamford and @bacteriacities Bonus: This issue also contains a highlight of our @CurrentBiology paper by @Anna_Dragos et al on prophage coded BGCs

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Akos T. Kovacs

@EvolvedBiofilm

3 years

Morphogenesis and cell ordering in confined bacterial biofilms -in PNAS “Vibrio cholerae biofilms embedded in hydrogels”

Morphogenesis and cell ordering in confined bacterial biofilms | Proceedings of the National...

Biofilms are aggregates of bacterial cells surrounded by an extracellular matrix. Much progress has been made in studying biofilm growth on solid s...

www.pnas.org

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Akos T. Kovacs

@EvolvedBiofilm

2 years

The most sustainable way to travel to a conference? Ready for two days of biofilm research

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Akos T. Kovacs

@EvolvedBiofilm

3 years

Yesterday, we had a farewell to @Anna_Dragos and celebrated her successful post doc years around B. subtilis biofilms and (pro)phages (15+1 publications). All the best in your new adventure in science ... and an era finished in the group

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Akos T. Kovacs

@EvolvedBiofilm

2 years

BiomeHorizon: Visualizing Microbiome Time Series Data in R Methods and Protocols in @mSystemsJ by Isaac Fink, @richabdill , @blekhman and @ferocious_sloth

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Akos T. Kovacs

@EvolvedBiofilm

9 months

Current issue of @CurrentBiology includes the back-to-back papers by @beeobanion / @Slebiomes and @JJSanchezGil / @dejongepmi on plant attracted bacterial taxa and (myo-)inositol... See my Dispatch (50 days free download) @LeidenBiology #MicrobiomeEcology

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Akos T. Kovacs

@EvolvedBiofilm

1 year

Construction and Modeling of a Coculture Microplate for Real-Time Measurement of Microbial Interactions @mSystemsJ from @dsegre

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Akos T. Kovacs

@EvolvedBiofilm

2 months

bacLIFE: a user-friendly computational workflow for genome analysis and prediction of lifestyle-associated genes in bacteria -in @NatureComms from @VCarryOn1 with @RaaijmakersJM @marnixmedema Cayo Ramos @ClaessenLAB @SpainkHerman @LeidenBiology

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Akos T. Kovacs

@EvolvedBiofilm

1 year

Cool @TrendsMicrobiol Forum by @RolfsMicrobes and Steven A Frank Evolutionary explanations for heterogeneous behavior in clonal bacterial populations

Evolutionary explanations for heterogeneous behavior in clonal bacterial populations

Cellular heterogeneity in clonal bacterial populations is widespread. Division of labor and bet hedging are common adaptive explanations for the function of such heterogeneity. We suggest group-level...

www.cell.com

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Akos T. Kovacs

@EvolvedBiofilm

6 months

Complexity of fungal polyketide biosynthesis and function @MolMicroEditors by @adicapuna et al from Reinhard Fischer

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Akos T. Kovacs

@EvolvedBiofilm

6 years

Weekend experiment by my daughters... they love to experiment!

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Akos T. Kovacs

@EvolvedBiofilm

6 years

Build your own soil: exploring microfluidics to create microbial habitat structures Superb @ISMEJournal perspective by Aleklett, Kiers, Ohlsson, Shimizu, Caldas & Hammer ( @lunduniversity @VUamsterdam @_amolf collaboration)

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Akos T. Kovacs

@EvolvedBiofilm

3 years

Can you guess the topic of the (now officially) accepted @ISMEJournal paper by @Anna_Dragos ?

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Akos T. Kovacs

@EvolvedBiofilm

2 years

Escherichia coli SymE is a DNA-binding protein that can condense the nucleoid @MolMicroEditors from @michael_laub8

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Akos T. Kovacs

@EvolvedBiofilm

9 months

A three-colour stress biosensor reveals multimodal response in single cells and spatiotemporal dynamics of biofilms NPJ Biofilms and Microbiomes from @RabeKersten @KITKarlsruhe

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Akos T. Kovacs

@EvolvedBiofilm

1 year

Composition and functions of bacterial membrane vesicles @NatureRevMicro by Masanori Toyofuku, Stefan Schild, @MariaK_Liaskos , and @leberl2

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Akos T. Kovacs

@EvolvedBiofilm

5 years

Such a great story from @theMaxwellLab in @nature A chemical defence against phage infection #Streptomyces #phages #secondarymetabolites #shapingbacterialcommunities

A chemical defence against phage infection

Nature - Streptomyces secondary metabolites provide a chemical defence against phage predation.

www.nature.com

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Akos T. Kovacs

@EvolvedBiofilm

1 year

Machine learning enables prediction of metabolic system evolution in bacteria -in @ScienceAdvances from @iwasakiw

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Akos T. Kovacs

@EvolvedBiofilm

3 years

Waking up for the weekend, like... 🎉 Authors celebrate around the 🌍, namely in 🇩🇰 🏴󠁧󠁢󠁳󠁣󠁴󠁿 🇩🇪🇭🇺🇳🇿🇨🇦

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Akos T. Kovacs

@EvolvedBiofilm

3 years

See our new @ISMEJournal paper by @XinliSun et al online on Bacillus velezensis - Pseudomonas stutzeri interaction in biofilms and plant health -collaboration with @ZhihuiXu2 at Nanjing ( @cemist_dtu / @GrundforskFond funded the work in Denmark)

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