Jonathan Kagan Profile
Jonathan Kagan

@jkagan1

7,284
Followers
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4,469
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Scientist at Boston Children's Hospital, Professor of Pediatrics at Harvard Medical School, Husband, Father.

Boston
Joined March 2014
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@jkagan1
Jonathan Kagan
2 years
Who wants to be a Harvard Professor? Calling all postdocs. I am running a search for a new junior faculty member. Specific area of biology is not specified--we are merely interested in smart people who want to change the world. Deadline November 1.
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@jkagan1
Jonathan Kagan
3 years
Microbial signals are not enough. PAMPs are not the only information gathered by our immune system. Oxidation of our own lipids—which occurs during infection-associated tissue injury—is the sister signal we use to gauge threats to the host.
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@jkagan1
Jonathan Kagan
1 year
Despite the view of PRRs as pathogen sensors, >24 PRRs in animals and plants are best-suited to detect infection failures that result from low fidelity virulence strategies (i.e. infection fidelities).
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@jkagan1
Jonathan Kagan
6 years
Today I was promoted to full professor at Harvard. While this honor goes on my CV, in reality it is due to the efforts of my scientific family. Their discoveries have made my career what it is. I love them all. #luckyboss @harvardmed @BostonChildrens
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@jkagan1
Jonathan Kagan
2 years
Grad school is hard when you love it and impossible when you do not. With PhD interview season beginning, applicants should note that you are interviewing us. Do not be passive. Get your questions answered and make the right decision for your life. Then go change the world!
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@jkagan1
Jonathan Kagan
4 years
For all interested in inflammasomes. A terrific venue for discussion.
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@jkagan1
Jonathan Kagan
4 years
Honored to share this big fat review on Toll-like Receptors, which was a collaboration with Kate Fitzgerald. Many thanks to the editors at @CellCellPress for their enthusiastic support. And thanks to Janeway for showing us the way. @FitzgeraldKate
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@jkagan1
Jonathan Kagan
2 years
If someone ever asks you “What is the function of cGAS?”, the response should be—which cGAS? Our new study reveals three functionally distinct classes of cGAS proteins in nature, each differing in the mechanisms of self-DNA induced interferon responses
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@jkagan1
Jonathan Kagan
1 year
If you want to live forever, don’t rely on therapies that target CD8 T cells. We found that checkpoint inhibitors protect young mice from cancer, but not elderly. In old mice, NLRP3 inflammasomes in hyperactive DCs prevent cancer via CD4 (not CD8) T cells
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@jkagan1
Jonathan Kagan
3 years
Ever wonder what happens when ecosystems clash? Our new study describes how the rules of pattern recognition are defined locally, not globally. We went to the deep Pacific Ocean to test the limits of our innate immune system.
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@jkagan1
Jonathan Kagan
3 years
What do cats, tigers, bears, seals and cheetahs all have in common? None of them use inflammasomes to link LPS detection to IL-1. And dogs? They don't detect cytosolic LPS at all. See our new study on the evolution of LPS detection. @pascal_devant
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@jkagan1
Jonathan Kagan
2 years
Single cell analysis is not a new concept. Cell biologists have been doing it for decades...simply using a microscope.
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@jkagan1
Jonathan Kagan
4 years
Global Release: Harvard Medical School Immunology Seminar Series Full schedule: Zoom link: Passcode: 840345
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@jkagan1
Jonathan Kagan
8 months
Want to know which innate immune pathways are needed to induce anti-tumor immunity? We discuss the five key dendritic cell activities that induce durable T cell immunity, and the immunotherapies that trigger them to protect for life.
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@jkagan1
Jonathan Kagan
4 years
Note to all conference participants. After your alloted speaking time, I stop caring what you say. And you are screwing the person speaking after you.
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@jkagan1
Jonathan Kagan
2 years
Calling all postdocs! We are looking to hire the next Harvard Professor. Will it be you? If you are skeptical of dogma and love to talk data and big ideas, then we would love to meet you. Deadline November 1. All areas of biology considered.
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@jkagan1
Jonathan Kagan
1 year
An ancient posttranslational modification controls an innate immune signaling protein. Gasdermin D must be oxidized on cys192 to induce pyroptosis. So proud of my fantastic student Pascal Devant and his co-authors Elvira Boršić & Elsy Ngwa.
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@jkagan1
Jonathan Kagan
2 years
The pyroptosis executioner gasdermin D (GSDMD) is a redox sensor. Our new study demonstrates that GSDMD is oxidized to potentiate its oligomerization and pore forming activities, with Cys192 playing a critical role in ROS responsiveness.
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@jkagan1
Jonathan Kagan
1 year
cGAS evolution, IFN and cancer, oh my!. Our new study describes the ways cGAS detects self DNA and drives IFN responses in cancer. Mouse and human and chimp cGAS all behave differently. Preclinical implications abound.
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@jkagan1
Jonathan Kagan
5 years
cGAS is a PI(4,5)2 binding protein. Membrane localization as a means of self nonself discrimination. So proud of my student Kat for a great job @katbarnett3 @harvardmed
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@jkagan1
Jonathan Kagan
2 years
I would recommend that someone in power somewhere read this and do whatever he says to do. Then thank him when it all works out. @RMedzhitov @YaleIBIO
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@jkagan1
Jonathan Kagan
2 years
You are so manipulative! Lung bacteria trick our immune system to induce the wrong type of inflammatory response--resulting in allergy instead of anti-bacterial defense. Kudos to Medzhitov and colleagues on this terrific work. @RMedzhitov @YaleMed
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@jkagan1
Jonathan Kagan
5 years
Synthetic Biology meets Innate Immunity. Design of myddosomes that induce interferon responses or necroptosis and inflammasomes that induce interferons. So proud of my postdoc Yunhao Tan for his excellent study. @harvardmed @bostonchildrens
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@jkagan1
Jonathan Kagan
3 years
“I get by with a little help from my friends” -The Beatles Gasdermin D needs help to oligomerize and form pores. This help comes from reactive oxygen species (ROS), controlled by the Ragulator-Rag-mTORC1 pathway. Very pleased to share our new study.
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@jkagan1
Jonathan Kagan
3 years
LPS is directly modified by ubiquitin in the cytosol of human cells. Major implications for basic biology, infection biology and immunology. Kudos to @FelixRandow and colleagues on a very interesting study.
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@jkagan1
Jonathan Kagan
2 years
So incredibly excited that Ruslan Medzhitov is receiving the Excellence in Mentoring Award from AAI. I cannot think of a more deserving person. The number of leaders he has trained is astonishing--and growing every year. Kudos my friend! @RMedzhitov @ImmunologyAAI
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@jkagan1
Jonathan Kagan
5 months
30+ years after caspases were found to be interleukin-1 converting enzymes (ICE), the first caspase-cytokine structure is revealed. We identify caspase-4 as a specific pro-IL-18 converting enzyme and describe the CryoEM structure of this enzyme-substrate interaction.
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@jkagan1
Jonathan Kagan
4 years
My last lab meeting photo from my postdoc with @RMedzhitov circa 2007. Ten future PIs in the room. Good science. Great friends. @YaleIBIO
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@jkagan1
Jonathan Kagan
3 months
So pleased to see Ruslan Medzhitov recognized by the National Academy of Sciences for his foundational discoveries of innate immunity. Many congratulations to a great scientist, mentor and human being. @YaleIBIO @RMedzhitov #innateimmunity
@HHMINEWS
HHMI NEWS
3 months
Congratulations to HHMI Investigator Ruslan Medzhitov, who has been awarded the 2024 @theNASciences Jessie Stevenson Kovalenko Medal for foundational contributions to the understanding of innate immunity! Learn more: #NASaward
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@jkagan1
Jonathan Kagan
3 years
When asked why you study what you study, your only answer should be: Because it is cool sh*t. If that is not the answer, find something else to work on.
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@jkagan1
Jonathan Kagan
5 years
Thinking on the best way to support innovative science. Of the studies we have published over last decade, most (by far) were based on random ideas. Few were designed to serve an Aim in a grant. Anyone else have similar experience? Shall we rethink how we fund research?
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@jkagan1
Jonathan Kagan
5 years
For the trainees: Every translational opportunity we have to treat disease derives from basic science exploration. Understanding how things work is a first principle. Applying knowledge of how things work to treat disease is a second principle.
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@jkagan1
Jonathan Kagan
2 years
Normally, I would offer an alternative lead-in to a cool study than the title. But in this case, the title says it all: "Bacterial gasdermins reveal an ancient mechanism of cell death" Congrats to Kranzusch and Sorek on this outstanding study.
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@jkagan1
Jonathan Kagan
3 years
Who wants to be a new PI at Harvard Immunology? Any area of Immunology is of interest. We are especially excited about diversifying (no matter how you define this term) the makeup of the dept. Come join a great group of scientists.
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@jkagan1
Jonathan Kagan
2 years
Gasdermin proteins as membrane channels that operate in living (hyperactive) or dead (pyroptotic) cells. We review how these ancient proteins assemble into channels (aka pores) and control inflammation, tumor immunity and host defense from infection.
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@jkagan1
Jonathan Kagan
4 years
COVID comment: Phagocyte inflammasome activity may not be the whole source of IL-1. In the lung, the amount of IL-1alpha present in epithelial cells is massive. This must be considered in any discussion of IL-1 in this organ, as any form of cytolysis will cause its release.
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@jkagan1
Jonathan Kagan
2 years
LPS detection-the centerpiece of innate immunity-is not as common in nature as one would expect. The terrific Anna Gauthier reviews knowledge of LPS detection and discusses which PAMPs may be universally detected by metazoans as a defense strategy. Spoiler--it is not LPS.
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@jkagan1
Jonathan Kagan
2 years
cDC2s, critical for T cell mediated immunity, can finally be ablated. Ken Murphy and colleagues reveal how these dendritic cells are produced and how they can be manipulated. Kudos on this very important study.
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@jkagan1
Jonathan Kagan
2 years
Type IV IFNs take the stage. A new family of interferons identified in zebrafish and other vertebrate species.
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@jkagan1
Jonathan Kagan
10 months
Anyone who thinks that a scientist cannot change their hypothesis (in a heartbeat) when new data arises has never worked as a scientist. @COVIDSelect
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@jkagan1
Jonathan Kagan
1 year
Many think that a magic moment in your career can be reached when it gets easier. This process of Waiting for Godot is the cause of much frustration. This magical moment does not exist. The magic moment is when we finally realize that today is the best day. Not tomorrow.
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@jkagan1
Jonathan Kagan
9 months
STING is a membrane channel. Findings help explain why STING has all those transmembrane domains, a question that has puzzled many (including me) for years. Kudos to Hacohen, Irvine and Bingxu Liu on this interesting discovery. @BingxuL @MIT
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@jkagan1
Jonathan Kagan
4 years
I would love to live in a world where all grant reviews involved in-person interviews, so the applicants would have the chance to rebut BS critiques in real time. I would also love to live in a world where unicorns are real.
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@jkagan1
Jonathan Kagan
4 years
On certain days, I see so much hatred of academia on Twitter. On those days, I think about how much good fortune can contribute to success. I had the tremendous fortune to train with two fantastic mentors: Craig Roy and Ruslan Medzhitov. If only we could all be so lucky.
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@jkagan1
Jonathan Kagan
4 years
Jorge Galan explains how Salmonella can be killed by our own cells. #Immunometabolism and #hostdefense at its finest. The newest of a lifelong list of classic studies by a living legend. @YaleMed
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@jkagan1
Jonathan Kagan
1 year
There is a lot of faith in the job of a PI. Faith in ideas noone likes. Faith in people who have not proven themselves. Faith in ourselves to not be one-hit-wonders. There is a kinship among those who do this job-even among competitors. That kinship is why this job is great.
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@jkagan1
Jonathan Kagan
3 years
A very important message here. And I would amplify that calling anyone out on Twitter, as opposed to communicating directly, is poison for the community.
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@jkagan1
Jonathan Kagan
7 months
2023 Nobel Prize in Medicine. A wonderful example of how the study of innate immunity can impact human health. Somewhere Charles Janeway Jr. is smiling today. #NobelPrize2023 #innateimmunity #TLRs #COVID19
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@jkagan1
Jonathan Kagan
10 months
The family of cGAS like receptors expands 1000 fold. Beautiful structure-function analysis of new innate immune signaling proteins by Kranzusch et al. Kudos to the authors on this important discovery. @harvardmed @DanaFarberNews
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@jkagan1
Jonathan Kagan
4 months
Lupus as a disease of innate immune dysfunction. Toll like receptor signaling changes, linked to defective endosomal trafficking, are revealed as drivers of lupus symptoms. Kudos to Majer and colleagues on this important discovery. @MajerOlivia #lupus
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@jkagan1
Jonathan Kagan
1 year
We often say that innate immune pattern recognition receptors detect pathogens. But do they really?
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@jkagan1
Jonathan Kagan
5 years
In 1776, a small group of dedicated individuals disrupted political norms and changed the world. A new study in Nature demonstrates the same principle applies in science. Small groups are most innovative.
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@jkagan1
Jonathan Kagan
2 years
So proud of this fantastic scientist, the newly minted Dr. Anna Gauthier. She defended her dissertation today with a tour de force discussion of LPS biology and innate immunity. @RatherLargeNerd @RandiRotjan @harvardmed
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@jkagan1
Jonathan Kagan
5 years
Honored to share our perspective on how inflammasomes (and the entire innate immune system) detects threats to the host. Thanks to Charlie Evavold for writing this and to the fantastic Immunity editors for their support.
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@jkagan1
Jonathan Kagan
2 years
The increasing use of kits in science disturbs me greatly. Plasmid kits prevent students from understanding biochemistry. And organelle kits like this one are even worse--buffer ingredients are not listed. Speed should never bypass understanding.
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@jkagan1
Jonathan Kagan
3 years
Toll-like Receptors that detect nucleic acids and control immunity. An authoritative review by Barton and colleagues. @barton_lab @berkeleyMCB
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@jkagan1
Jonathan Kagan
5 years
These types of honors are bestowed on me as the PI, but they are a testament to the skills, passion and hard work of my trainees. The best #sciencefamily I could ever wish for.
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@jkagan1
Jonathan Kagan
2 years
More evidence that Gasdermin pores promote IL-1 family cytokine release in the absence of cell death. In addition to IL-1b, IL-33 is now found to be released from living cell via Gasdermin D. Kudos to Sun et al on this interesting study.
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@jkagan1
Jonathan Kagan
2 years
What can Tuberculosis teach us about Parkinson Disease? The fantastic Patrick & Watson lab takes this approach and reveals novel connections in cell death pathways. Many congrats on these important discoveries. @The_PW_Lab @TAMU
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@jkagan1
Jonathan Kagan
1 year
NLRP3 does not associated with the Trans Golgi. A new study found that stalled endosomes contain a common TGN marker--these organelles recruit NLRP3 to promote inflammasome assembly and activation. Kudos to the authors on this important study. @
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@jkagan1
Jonathan Kagan
3 years
A new function for a set of DAMPs: Prevention of viral entry. Most DAMPs promote host defense by inducing inflammation, but we found a set that does not alter inflammatory or interferon responses during infection.
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@jkagan1
Jonathan Kagan
2 years
A link between anti-mitotic cancer drugs and inflammation via cGAS-STING. Beautiful study by Mitchison and colleagues shows that chromatin bridges-not micronuclei-are platforms for cGAS signaling. Kudos to all authors. @harvardmed
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@jkagan1
Jonathan Kagan
7 months
Want to learn about cutting edge immunology? Join us at historic Cold Spring Harbor Labs in 2024 for a conference on Gene Expression and Signaling in the Immune System. @CSHL #inflammation #infection #immunity #Immunotherapy
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@jkagan1
Jonathan Kagan
11 months
USA, fighting for freedom since 1776. NY Yankees, fighting for (and winning) World Series since 1923. Gasdermins, fighting infections since before multicellularity emerged. A review on gasdermin biology by the fantastic Pascal Devant.
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@jkagan1
Jonathan Kagan
2 years
TLRs never stop teaching us about host-pathogen interactions. Madhani et al reveal a fungal ligand for TLR4 that drives allergic inflammation. Congrats to the authors on this important discovery. @hitenmadhani
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@jkagan1
Jonathan Kagan
2 years
NOD2, one of the first described innate immune receptors, gets a big boost from the Hornung lab. A kinase acts upstream of NOD2 to control inflammation by this pathway. Kudos to the authors on this exciting discovery. @v_hornung @LMU_Muenchen
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@jkagan1
Jonathan Kagan
2 years
Many congrats to Kate Fitzgerald on receiving the Meritorious Career Award from AAI. She has been a role model for us all, as a person and explorer. @FitzgeraldKate @ImmunologyAAI @UMassChan
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@jkagan1
Jonathan Kagan
2 years
A new ligand for the NLRC4 inflammasome. Human macrophages can sense a virulence factor from Salmonella, which enables them to use inflammasomes to fight infection. Kudos to Sunny Shin and colleagues on this important discovery. @SunnyShinLab
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@jkagan1
Jonathan Kagan
3 years
A "fly" new way of antiviral immunity. cGAMP/STING induced transcriptional responses pre-date evolution of interferons. A beautiful study in Drosophila by Imler and colleagues that has significant implications for the field.
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@jkagan1
Jonathan Kagan
6 years
Like vampires at your front door--Dendritic cells need to be invited into a lymph node. A fascinating new study by Sokol and Luster.
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@jkagan1
Jonathan Kagan
2 years
How do cells secrete (release) interleukin-1, a key cytokine needed to promote inflammation and memory T cell functions. The fantastic Charlie Evavold discusses current knowledge on this important topic in our review. @Synth_Immune
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@jkagan1
Jonathan Kagan
4 years
I want to work with creative people who have a burning desire to prove to the world that they are as good as they think they are. Doesn't matter if you are white, black, green or purple. Passion comes in all colors. If your boss doesn't feel the same way, get a new boss.
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@jkagan1
Jonathan Kagan
4 years
Regulation of inflammasome mediated pore formation and pyroptosis extends further than we thought. See our new study identifying Ragulator-Rag complex as factors required for pore formation after gasdermin d has been cleaved.
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@jkagan1
Jonathan Kagan
3 years
Our stem cells use RNAi to protect against viral infections, just like flies and other ancient organisms. Major implications for our understanding of host defense evolution. Kudos to Reis e Sousa and colleagues on this important discovery. @ReiseSousaLab
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@jkagan1
Jonathan Kagan
10 months
An immune cell help you avoid food allergens. Florsheim and Medzhitov discover mast cells as key agents that link food allergens to avoidance behavior. Kudos to the authors on this important discovery. @florsheim_eb @RMedzhitov @YaleIBIO
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@jkagan1
Jonathan Kagan
3 years
Assistant Professor in Innate Immunity. Come join a great group of scientists at Harvard. Zoom interviews are planned, to ensure safety and to allow flexibility for those with family responsibilities.
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@jkagan1
Jonathan Kagan
5 years
Ever wonder if @harvardmed and @BostonChildrens are a great place to work, just give me a call. Their support over the years has been a game-changer for my lab and my trainees.
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@jkagan1
Jonathan Kagan
3 years
Kill the executioner. A bacterial virulence factor causes gasdermin degradation to prevent human cell death and promote infection. Congrats to Dixit and colleagues on this important discovery. @dixitvishva @genentech
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@jkagan1
Jonathan Kagan
2 years
Ever wonder how cytosolic PRRs can detect intra-phagosomal bacteria? Steph Ragland discusses the known mechanisms and offers perspectives on the many observations that remain unexplained. @StephRaglandPhD @harvardmed @BostonChildrens
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@jkagan1
Jonathan Kagan
2 years
Inflammasomes that fight cancer. T cells that control COVID-19 infections. Glial cells that mediate MS. What do all of these statements have in common? They are all topics of the BEST OF 2021 Reviews by Trends in Immunology. @TrendsImmuno
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@jkagan1
Jonathan Kagan
2 years
LIVE at Cold Spring Harbor Labs in Nov. 2022. Executive Producers: Art Weiss, Sasha Rudensky, Ellen Rothenberg and Jon Kagan are pleased to present the conference: "Gene Expression and Signaling in the Immune System" Stars and supporting cast to follow.
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Jonathan Kagan
3 years
To everyone who refuses an FDA approved vaccine because they "Don't know if it's safe", remember all the things they have taken simply bc a friend at a party told them it was great stuff. Selective behavior anyone?
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@jkagan1
Jonathan Kagan
5 years
The Kagan lab at Harvard is looking to hire postdocs who take creative approaches to immunology. Agnostic to model system. Please contact me if you are interested. Email can be found at Please RT. @harvardmed @BostonChildrens
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@jkagan1
Jonathan Kagan
2 years
cGAMP signaling in ancient organisms. Very nice proof that a (likely) sting mediated transcriptiinal response precedes evolution of interferon. And one of the induced gene products kills bacteria. Kudos to @russellevance and colleagues.
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Jonathan Kagan
4 years
@SusannaLHarris It is called a Doctor of Philosophy for a reason. Not Doctor of pipetting. To really benefit from the degree, you need the intellectual freedom that does not come with being locked to the bench.
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@jkagan1
Jonathan Kagan
3 years
Beyond Pattern Recognition: A new mechanism used to defend against viruses. We found that Bcl-2 family members act as Guard proteins to detect virus-mediated translation inhibition-->leading to pyroptosis via gasdermin E and antiviral immunity.
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@jkagan1
Jonathan Kagan
2 years
An excellent review on gasdermin biology. Highly recommend for those interested in how IL-1 is released from dead (pyroptotic) or living (hyperactive) cells. Congrats to the terrific Sebastian Ruhl and Petr Broz. @broz_lab @ruhl_sebastian
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@jkagan1
Jonathan Kagan
2 years
Wondering why immunotherapies do not always work? A new study discovers cancer cells within tumors that are resistant to immune attack. Kudos to Agundo and colleagues on this important study. @JudithAgudo1 @harvardmed
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@jkagan1
Jonathan Kagan
2 years
Ever wonder what transcription factors do within cells that do not have a nucleus? A highly creative study reveals that NFAT regulates host defense in cells that lack nuclei. Kudos to Zanoni and Poli on this discovery. @Lo_Zanzi @vale_vpoli @harvardmed
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@jkagan1
Jonathan Kagan
3 years
cGAS like protein in flies controls antiviral immunity. Fantastic study by Kranzusch and colleagues expands the realm of PRRs. @harvardmed @DanaFarber
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