Postdoc: Oslo Natural History Museum. Inverts, Outreach, Palaeo and Phylo. Sometimes also a tRPG author. he/him. En/De/Ga/日本語/No OK (in decreasing proficiency)!
Welcome to the base of our tree!
Ecdysozoa are a group of invertebrate animals! They're named after "Ecdysis", which means they moult as they grow.
As you can see, they're plenty diverse - some are very recognisable, some less so. They're actually the majority of named animals!
@emekdemir
I agree with you, though as a PhD student, I've gotten somewhat used to the exchange:
"I'm with the Molecular Palaeobiology lab at Bristol University."
<blank stare>
"... It's <PI>'s lab"
"Aaaaah, gotcha."
@ellle_em
Me before reading: Oooh, I wonder how many people have like, Regency-era Romances, or American classic. Might be a fun library of comfort reads to check out!
Me after: Oh my I think I need a sit down.
The evolution of desiccation resistance in tardigrades was a huge part of my life for 2 years - I am elated my work w/
@gaou_ka
&
@BristolPalaeo
was picked as a highlight by
@GenomeBiolEvol
! Casey has done a great job expressing why it is so exciting, too!
For reference, this is discussing my new, user-friendly phylogenetic artifact identification software, BOSTIn!
Preprint will come *nebulously soon* (probably in a few months), alongside a GUI, but I am still on the hunt for pre-Alpha usability testers!
The tardigrades are renowned for their resilience, able to survive UV, pressures, desiccation and high and low temperatures.
But did you know that, in that protective tun state, they get to do nothing and only revive when the stress passes, sometimes decades later? Sign me up!
@aitaikimochi
Obsessed with the 90s boy band energy they are giving off (Highlander in the black jacket and the bucket hat because he does the obligatory rap verse in the breakdown ofc)
@UnseenJapanSite
"敵に塩を送る" - sending salt to the enemy - meaning "play fair" was a phrase I picked up early on. It refers to an old Sengoku-era story when Uesugi Kenshin shipped salt to Takeda Shingen despite the war.
@The_McJones
I'd never thought of crocodiles! To me, it is a loudspeaker with the little one shouting "YOU ARE THE BIGGEST NUMBER"
... This has the side effect that when I try to work out which one to use I mouth "you are the biggest number" which sometimes results in stares in the office,
In the UK, the common name of tardigrades has changed over time from 'Moss Piglet' to 'Water Bear'. This adoption of the German common name is believed to have drastically decreased the danger of being near 30-50 of them at any given time.
@makapatag
It's just... sad. 大人しく does mean "quiet down", but etymologically it uses the kanji for adult - it's in the context of "stop behaving like a child" The localisation retains the poetry!
Language and tl is so fun - I don't understand why folks don't revel in having fun with it!
@OneShotRPG
@DungeonCommandr
My favourite patron to turn up in a game I've run was an Archfey who was the half-sister of the PC (their mutual father being a famous former bard). The Warlock was trying to live up to her father's memory, the Patron trying to obtain a connection to a father figure she never had
It's my brother!
All the way from Norway (and as a member of Forskerforbundet, the Norwegian Universities and Research Trade Union) I wanted to share a bit about why this ballot is so important: not just in the UK, but globally. 1/7
“This fight is our fight. You’re standing up for our members and every working person when you say no to precarity and low pay.”
Massive thanks to
@EquityUK
General Secretary
@paulwfleming
for this message of support ✊
#ucuRISING
First first author paper out!
Really proud of this - we used new fossil and molecular data to time gene duplications to infer the visual ecology of species on the lineage towards arthropods, including Anomalocaris and Hallucigenia!
#phdchat
#Paleontology
Oh! New in Zoologica Scripta today!
I went through every tardigrade eDNA 18S in Genbank and tried to get a family ID using only public access data & tools.
Then I present a simple, repeatable method for anyone to do the same for their taxa of interest!
On SJ topics, I normally retweet without comment because I don't have anything worthwhile to contribute.
Recently though, there has been a discussion about the white working class and academia.
From a WWC background, I want to talk about why I don't want WWC advocacy. [Thread]1/6
@xhormonesx
Can do - and I can do you one better! It's themed around a new phylo-analysis metric I published last year: nRCFV is useful, but I'll admit also quite difficult to understand!
The whole talk is also available on my GitHub, in case you want the context!
For
#PhD
students struggling with all the new stuff - it gets easier. This dataset just doesn't look right on alignment. Three years ago, this would have stumped me cold. Now I know the tools, when to use them, and I think I've sussed it in three days. It gets better.
@mmamas1973
Well, they are all totally unqualified to run a country and for some unknown reason seem to think they have been doing a fine job, so I wouldn't trust them to develop any sensible judgement on this one...
@JennyENicholson
This is also true of palaeontology.
I love that your kid likes dinosaurs and honestly probably knows far more about that than me.
I assure you they are less excited than me about extinct insects and cephalopods
@InverteFest
I'm working on a postdoc about how and why some tardigrades came to the land from the sea (and why some of them made the very sound decision to go back).
Lots of computational analysis, but lots of very cute marine tardigrades too! (Photo from Schulz and Schmidt-Rhaesa)
So excited to see this come out!
@PascualAnaya
lead an incredibly comprehensive and detailed study. My part in the whole thing was relatively small, but it was an absolute blast to be involved, and it's a brilliant paper
This might have been the best one yet! Thanks
#SMBE2023
. Some of that was seeing so many old friends and colleagues after *half a decade*, but so much of it was down to an incredible venue, great symposia and a huge amount of hard work from the organisers at
@SMBEmeetings
@Itatim05
Haha! Don't worry - this slide is a joke about how difficult phylogenetics is if a user is not familiar with the mathematical principles (the full talk is about how we can make tools that educate researchers about phylogenetics). You can find it here:
@RaraSensei
It feels like a very Monolingual complaint. Like... anyone who has ever ordered a Coffee in Japan will realise that if you hit that English F with your lip you become unintelligible.
Now I am imagining resolutely pronouncing Oslo Oz-Lo when speaking Norwegian too.
@Danjuro
And here was me expecting a half hour video on Hanko and fax machines but it is the darn cake vending machine again. Always getting let down by these clickbait titles!
The flight is sorted! I'll begin my first postdoc in November, as a
#JSPS
fellow, working on
#tardigrades
in Japan! Trying to get better at the Twitter, so expect regular updates about moving so far away! Many thanks to
@royalsociety
and
@gaou_ak
for this opportunity!
#phdlife
New Paper! I started this about 5 months in to my PhD in 2015. I first submitted this manuscript in summer 2017. It is now published! But I'd never have gotten there without a lot of help and support from great folk.
@BristolPalaeo
SO! SUMMARY THREAD 1/8
@Trey_Explainer
*hides the joke pitch document he made for this years ago*
OK so I'm not saying the roadmap didn't get to Troy until Phase 4 but....
(we have to do the Argo first - Golden Fleece is the best opening crossover movie)
Oh! Beaten to the punch!
Yes! I have a new manuscript at GBE on the evolution of Tardigrade Extremotolerance!
The biggest part of my
@jsps_sns
Postdoc, based on the simple thesis:
"You don't need to resist desiccation if you live in water, which is wet."
New paper! My first review, written w/
@Valero_Gracia
and
@fez_nhm
, is a practical guide to problem solving in phylogenetic analysis.
Hopefully the perfect first destination for someone new to the field. For veterans, maybe you'll find a new tool or two!
Inspired by Armin's suggestion earlier today, and this radical new paper here:
Let's introduce the phylogenetic tree of the coolest folks on earth, the Ecdysozoa, in TWITTER THREAD FORMAT (We'll be using Richie's publication as a framework for this thread)
So... I am aware that follwing a photo of mild academic shitposting I now have 120% more followers on this site than last night.
I'm going to apologise in advance - this account is solid 33% divisions of academia, anime/tabletop rpg memes and venting about current events.
I think... that the interview today went well? I'm really excited about the post, so fingers crossed! I was honest, and enthusiastic, and that's really all you can do.
@_sh1opan
I have powerful "cult face" I think. I used to mark down every time it happened - over two years someone triee to get me to join a cult on average once every 6 weeks (though that one day in Niigata when I got approached by 4 separate cults in like 4 hours was *an experience*)
Alright! Official announcement!
Most folks know, but from the 1st July, I will be back in Japan! This time, I will be working at JAMSTEC (海洋気候), exploring the biodiversity of small animals in the deep sea.
I'm excited for a new role and some new challenges on a new adventure!
Another postdoc rejection today (making that a comfortable 5 so far this year), and applying for 4 more posts this weekend!
Failure is important to share, for realism's sake. The academic job market can be pretty tough, but hopefully I'll get something~
@ProfRachelGaN
Principal Investigators will investigate the principles
That Principle Investigators principally ponder
Postulation upon principles is principal to Principals
For principal of Principals are Principals with principles.
... I'm sorry I couldn't help myself.
Huzzah! So... my second first author paper is properly out now in GBE, having shifted from early access to the final version. We found an objective way to identify sequences that might be prone to causing phylo artifacts!
@GenomeBiolEvol
@HTTPaladin
Honestly "Sharks of the Sun and Gun" sounds like an RPG about organised crime in sun-drenched, over-saturated 80s/90s Miami, all crisp white suits, shoulderpads and synths and I'm unusually hyped by this autofill prompt.
Waiting for my last backup to finish before I leave my lovely lab home here for the last time! Giving a presentation on Friday, but otherwise that's the end of my
#JSPS
Postdoc, courtesy of the
@royalsociety
! I wanted to share some informal tips I had! 1/7
@itatiVCS
It's kinda baffling to me that when someone with a good PhD experience (like me) hears someone else's bad experience, their immediate thought is "that shouldn't be something we talk about", as opposed to "that sucks, how can we make it so everyone has the same good time I had?"
@GailSimone
OK so here's my pitch.
A UK TV legend to play the uptight Percy Gravy (maybe a Sanjeev Bhaskhar or Tony Gardner?), on loan from the Met and out of place in the Southern US.
It is a fish out of water odd couple where one side doesn't even get why Biscuits and Gravy is a gag.
Arrived safely in Norway and slept for 12 hours straight! Then found myself going to the loo and reaching for the non-existant bidet button subconsciously. I will miss you Japanese toilet friend!
@WryCritic
For sure on that one. I know a great many things about phylogeny, but I know a lot of folks who never set foot in a uni who are a lot *actually smarter* than me. Think there's some sincere confusion in society between "knowing stuff" and "being intelligent"
Possibly controversial: The feeling of tiny insect legs scuttling along the little hairs on your arm and the back of your hand is one of the most wholesome sensations in nature.
@OneShotRPG
Immediate reaction: well, I can see that it could be important to have diverse public buildings that suit different kinds of people. The problem is that we struggle to fund ones that aren't libraries.
After scrolling: Oh he just doesn't like free public spaces, yeah w/e.
My most recent paper (on Tardigrade vision) is now properly out in
@GenomeBiolEvol
! It's a really cool piece of work with
@gaou_ak
at Keio University and
@BristolPalaeo
, funded by a JSPS postdoc from the
@royalsociety
and JSPS!
Cliff's Notes Follows! 1/9
@OneShotRPG
Agreeing with the "miserable capitalism", it occurred to me that Stun seems pretty commonly used for capturing high priority targets. Maybe it's an unspoken agreement - mass deployment of stun means developing anti-stun tech, which puts the lives of the ruling class at risk.
@DaniRabaiotti
I wish I could say it was the first time I had seen it but it is like a typical bit of classism in academia, tbh. The tone policing exists to explicitly exclude folks with particular vernacular.
@hormiga
The first way I explained doing a PhD to my family was "It's like an apprenticeship, but at the university", and they immediately grasped the trainee/employee duality. It continues to baffle me that this is a matter of contention
@mattcolville
I ran into a similar issue with them, and altered their flavour to make Named.
Like a cosmic white blood cell, the universe gets bored of waiting and hijacks a body to do what needs to be done for narrative to flow by supplying them with the skills they need, when they need it
@makapatag
Scarlet affects a speech pattern ending sentences in "わ" to convey how posh her character is - having her talk in elaborate layered metaphor is a great way to communicate that idea.
All these languages are beautiful - the localisers have really given them unique chances to shine
wrote a whole new piece of software tonight from scratch and I am very very pleased with myself. Running a calculation on a big dataset has shifted from hours to seconds
@jomcinerney
Might be completely apocryphal - I was told that it was a Germanification due to migration in the 1800s. Tuna in German being "Thunfisch" meant that "Tuna Fish" ended up as a common halfway parlance
@writerofscratch
Especially with JAL's domestic flight discounts. I can't see it being worth it for most casual travellers now, and it will really limit the range of many holidaymakers I suspect. Probably a lot of irritated folk in tourism in Hiroshima/Sendai right now I expect.
@dame_danni
@Thrawn589
@mattcolville
I remember reading (unsure of the veracity) that the "British Villain" trope originated because Hollywood movies like Star Wars filmed in the UK to cut costs, and so cast American stars and local villains (as they got less screen time, and meant you counted as a union production)
@lackingceremony
Oh yeah that was difficult... There is reassurance that a lot of us compile a big enough book of rules. If anything, it can be an advantage sometimes - I've had moments where I've been paradoxically more aware of my social behaviour than neurotypical folks since it isn't innate.
This is objectively pretty unimpressive overall, but I wanted to share progress a bit. Probably my last kanji test before I leave - two years ago I could read about 5 hiragana!
@franzanth
If cat/dog is the question with the power to end budding friendships, asking cteno/sponge is coldly staring into another man's eyes, zippo lighter in hand, prepared to burn all bridges between you.
@OhsakaRin
@2_kk00n
Peepo Choo is by Black American mangaka Felipe Smith (first Western author in a Japanese manga!) and draws a lot from personal experience. Mentioned elsewhere, but also gets into J-subcultures that fetishise Hip Hop/Black US culture. Really insightful, strong CW for sex/violence.
YAY! So, my new paper on tardigrade systematics (with
@gaou_ak
) popped up online today!
The question of the moment is: What's in a name - how do we determine what's an Order, and what's a Class, and are 18/28S branch lengths reliable indicators?
My paper, describing a new genus and species of lobopodian, has just been published.
Mobulavermis adustus is a large relative of Kerygmachela and Utahnax. For those who can't access the paper, I will the findings summarize below.
1/9
A small achievement, but a nice one all the same - my paper with
@gaou_ak
on tardigrade systematics last year got enough citations to be one of Zoologica Scripta's
#TopCitedArticle
of 2021-2022! Credit of course to
@royalsociety
&
@jsps_sns
for helping fund the project!
returned from the field happy but tired out!
How tired, you ask?
I just stared at a kettle for ten minutes wondering why it wasn't boiling.
I had not plugged it in
@Swordsfall1
Exact opposite rn. Currently on session 3 of a one session plan because the PCs talk to everyone and spent real life hours socialising in the wagon.
Makes me think I should prep less sometimes, but I know the moment I do they'll accelerate from 0-"Get Shit done" in 60 seconds
Going to piggyback a bit off something today! Like
@TimCosmos
and
@rpancost
, I too am from a state-educated working class background, and now I'm a postdoctoral researcher at Keio University in Japan. Unlike them, my photo game is weak, so this is from NYE! We're out there!
Really excited for the
@royalsociety
Anhydrobiosis meeting today!
So excited, apparently, that I turned up an hour early because I forgot about the UK-Norway time difference.
-better than the other way around-
On the wild hunt for a postdoc. If you have a position coming up in a lab that needs a phylogenetics person or an ecdysozoan person please get in touch!
Got experience with molecules, fossils, modern morphology! Single sequence protein evo through to big multi-gene datasets too!
@HarmitMalik
One thing about SMBE is that it is a really interdisciplinary conference, so I think it is key to make sure that where possible talks are engaging to everyone in attendance, across specialities.
@SpeciationLab
was a great example of this at
#SMBE2018
, my favourite talk so far!
@SarahTaber_bww
This has resolved a burning question in my head for ages (why Cheddar Cheese isn't a PDO). I had no idea that Cheddaring was a process as well as a place!
More of Norway explicitly and aggressively being hostile to foreigners using the pandemic as a feeble excuse. I don't normally ask this of folks, but I'd really appreciate it if you could read and get more eyes on this however you can. It's absurd and unacceptable
Another twist to the neverending story of arbritary administrative decisions. This time on
#karantenehotell
. After Ana and Pedro finally got an exemption to work
@NHMOslo_Science
@UniOslo_NHM
() their legal rights were violated once more. A thread 1/14
@DistantValhalla
On the other hand, that To Heart VHS might convince him to abandon his life of petty crime, devote himself to building a maid robot, and then seek to win her heart
More seriously, sometimes I genuinely think my postdoc has taken me to one of the most beautiful places on earth. So, many thanks to
@royalsociety
and the JSPS postdoctoral fellowship!
#jsps
Another day, another three acknowledgements that I am an illuminating and eminent scientist whose work would be welcome in... Journal of Soil Health and Crop Productivity, Clinics of Oncology and Annals of Medicinal Chemistry.
What can I say, my work is interdisciplinary -.-